Welcome to Dragonfly’s documentation!

Dragonfly is a software package for single-particle diffractive imaging data analysis, implementing the EMC (Expand-Maximize-Compress) single-particle reconstruction algorithm using MPI and OpenMP.

User Guides

• Installation
• Quick Start with Simulations
• Data Stream Simulator
• Configuration Guide
• Quick Start with Experimental Data
• Progress Viewer (autoplot)
• Frame Viewer
• Frequently Asked Questions

Background

• Background

API Reference

• API Reference
  • Detector Module
  • EMC File I/O Module
  • Model Module
  • Quaternion Module
  • Iterate Module
  • Parameters Module
  • Reconstruction Module
  • Utilities

Indices and tables

• Index

• Module Index

• Search Page